diff --git a/Source/Core/DolphinQt/GameList/GameList.cpp b/Source/Core/DolphinQt/GameList/GameList.cpp
index 2f83d5b2b7..edcb38923e 100644
--- a/Source/Core/DolphinQt/GameList/GameList.cpp
+++ b/Source/Core/DolphinQt/GameList/GameList.cpp
@@ -329,6 +329,9 @@ void GameList::ShowContextMenu(const QPoint&)
       auto* perform_disc_update = menu->addAction(tr("Perform System Update"), this,
                                                   [this, file_path = game->GetFilePath()] {
                                                     WiiUpdate::PerformDiscUpdate(file_path, this);
+                                                    // Since the update may have installed a newer
+                                                    // system menu, trigger a refresh.
+                                                    Settings::Instance().NANDRefresh();
                                                   });
       perform_disc_update->setEnabled(!Core::IsRunning() || !SConfig::GetInstance().bWii);
     }
diff --git a/Source/Core/DolphinQt/MainWindow.cpp b/Source/Core/DolphinQt/MainWindow.cpp
index 3e97e37a5f..6080457c5a 100644
--- a/Source/Core/DolphinQt/MainWindow.cpp
+++ b/Source/Core/DolphinQt/MainWindow.cpp
@@ -1245,8 +1245,8 @@ void MainWindow::SetStateSlot(int slot)
 void MainWindow::PerformOnlineUpdate(const std::string& region)
 {
   WiiUpdate::PerformOnlineUpdate(region, this);
-  // Since the update may have installed a newer system menu, refresh the tools menu.
-  m_menu_bar->UpdateToolsMenu(false);
+  // Since the update may have installed a newer system menu, trigger a refresh.
+  Settings::Instance().NANDRefresh();
 }
 
 void MainWindow::BootWiiSystemMenu()